Microbiology

1. Bacteria

•    Gram stain classification

o    Gram-positive: thick peptidoglycan wall, retain crystal violet stain purple/blue.

    Examples: Staphylococcus, Streptococcus, Enterococcus, Clostridium.

o    Gram-negative: thin peptidoglycan, outer membrane with LPS pink/red.

    Examples: Escherichia coli, Neisseria, Pseudomonas, Salmonella.

•    Bacterial shapes

o    Cocci (spherical): Staphylococcus (clusters), Streptococcus (chains).

o    Bacilli (rod-shaped): E. coli, Clostridium.

o    Spirochetes (spiral): Treponema pallidum, Leptospira.

•    Spore formation

o    Some Gram-positive bacteria form spores (e.g., Clostridium, Bacillus).

o    Spores: resistant to heat, desiccation; important in sterilisation.


2. Viruses

•    Genetic material

o    DNA viruses: e.g., herpesviruses (HSV, VZV, CMV), adenovirus.

o    RNA viruses: e.g., influenza, HIV, hepatitis C, SARS-CoV-2.

•    Enveloped vs non-enveloped

o    Enveloped: lipid membrane; less stable in environment (e.g., HIV, influenza).

o    Non-enveloped: more resistant (e.g., adenovirus, norovirus).


3. Fungi

•    Yeasts: unicellular; reproduce by budding.

o    Example: Candida albicans.

•    Moulds: multicellular, filamentous hyphae.

o    Examples: Aspergillus, Dermatophytes.

•    Dimorphic fungi: yeast form at body temp, mould form at environmental temp (e.g., Histoplasma).


4. Parasites

•    Protozoa: single-celled eukaryotes.

o    Examples: Plasmodium (malaria), Giardia, Entamoeba histolytica.

o    Life cycles often involve cyst and trophozoite forms.

•    Helminths: multicellular worms.

o    Nematodes (roundworms): e.g., Ascaris.

o    Cestodes (tapeworms): e.g., Taenia.

o    Trematodes (flukes): e.g., Schistosoma.

o    Complex life cycles often involve intermediate hosts.


5. Mechanisms of Host Defence

•    Physical barriers: skin, mucous membranes, cilia, gastric acid.

•    Phagocytosis: by neutrophils, macrophages.

•    Cytokines: interleukins, TNF-α, interferons promote inflammation and antiviral responses.

•    Complement system: opsonisation, chemotaxis, cell lysis.


6. Sterilisation and Disinfection


Method                            Main Use                                            Examples / Notes

Autoclaving                      Sterilisation (moist heat at 121 °C)     Surgical instruments, culture media

Dry heat                           Glassware                                           Higher temps than moist heat

Chemical disinfectants    Surface and equipment                       Alcohol (70%), chlorhexidine, bleach

Radiation                         Disposable medical supplies               Gamma rays

Filtration                           Heat-sensitive solutions                      Vaccine prep

UV light                            Surface air sterilisation                        Limited penetration


Extra Revision Pearls

•    Gram-negative bacteria have an outer membrane containing endotoxin 

                                                                        (lipid A component of LPS) septic shock.

•    Capsule: major virulence factor (e.g., Streptococcus pneumoniae, Neisseria meningitidis).

•    Biofilms: protect bacteria from antibiotics and immune clearance 

                                                                        (e.g., prosthetic infections with Staph epidermidis).

•    Acid-fast stain (Ziehl-Neelsen): for mycobacteria (TB, NTM).

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Author & Educational Disclaimer


Author:

Dr Phillip Cockrell BM FRCP DipClinEd


Dr Phillip Cockrell is a UK Consultant Physician in Internal Medicine, currently working at Queen Alexandra Hospital, Portsmouth University Hospitals NHS Trust. He has previously worked as a registrar across Intensive Care Medicine, Gastroenterology, Cardiology, Stroke Medicine, Acute Medicine, and Respiratory Medicine.


He has held senior leadership roles including Associate Clinical Director of the Acute Medical Unit, Clinical Director of Internal Medicine, and Chief of Medicine. Dr Cockrell has over 15 years’ experience in postgraduate medical education, having lectured extensively across the MRCP syllabus and contributed to MRCP revision teaching and course development.


Dr Cockrell holds a Bachelor of Medicine (BM), Fellowship of the Royal College of Physicians (FRCP), and a Diploma in Clinical Education (DipClinEd). His teaching approach is based on structured consolidation of complex medical topics to support efficient and effective revision for postgraduate examinations.


Purpose of this content:

The material on this page is intended solely for educational purposes to support revision for the MRCP (UK) Part 1 examination. It reflects examination-relevant principles of internal medicine and is designed to aid learning and pattern recognition.


Medical disclaimer:

This content is designed for postgraduate medical examination revision and does not constitute medical advice, diagnosis, or treatment guidance and must not be used as a substitute for professional clinical judgement, local guidelines, or specialist consultation. Clinical decisions should always be made in the context of individual patient circumstances and current national guidance.